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Variant #0000000167 (NC_000012.11:g.112910844T>C, NM_002834.3:c.853T>C (PTPN11))
Chromosome
12
Allele
Unknown
Affects function (as reported)
Affects function
Affects function (by curator)
Affects function
DNA change (genomic) (Relative to hg19 / GRCh37)
g.112910844T>C
Reference
-
DB-ID
PTPN11_000001
See all 2 reported entries
Frequency
-
Average frequency (gnomAD v.2.1.1)
Retrieve
Owner
Florian Bayersdorfer
Database submission
license
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
Created by
Florian Bayersdorfer
Date created
2023-06-27 10:32:58 +00:00 (UTC)
Date last edited
N/A
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Variant on transcripts
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Affects function
: The variant's effect on the function of the gene/protein, displayed in the format 'R/C'. R is the value reported by the source (publication, submitter) and this classification may vary between records. C is the value concluded by the curator. Note that in some database the curator uses Summary records to give details on the classification of the variant.Values used: '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown, '.' effect was not classified.
Exon
: Number of exon/intron containing variant; 2 = exon 2, 12i = intron 12, 2i_7i = exons 3 to 7, 8i_9 = border intron 8/exon 9.
DNA change (cDNA)
: Description of variant at DNA level, based on a coding DNA reference sequence (following HGVS recommendations); e.g. c.123C>T, c.123_145del, c.123_126dup.
RNA change
: Description of variant at RNA level (following HGVS recommendations).
r.123c>u
r.? = unknown
r.(?) = RNA not analysed but probably transcribed copy of DNA variant
r.spl? = RNA not analysed but variant probably affects splicing
r.(spl?) = RNA not analysed but variant may affect splicing
r.0? = change expected to abolish transcription
Protein
: Description of variant at protein level (following HGVS recommendations).
p.(Arg345Pro) = change predicted from DNA (RNA not analysed)
p.Arg345Pro = change derived from RNA analysis
p.? = unknown effect
p.0? = probably no protein produced
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Numeric
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Gene
Transcript
Affects function
Exon
DNA change (cDNA)
RNA change
Protein
PTPN11
NM_002834.3
+/+
7
c.853T>C
r.(?)
p.(Phe285Leu)
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